PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83295.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 392aa MW: 42145.3 Da PI: 6.5014

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83295.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	7.8e-18	72	117	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar ++ gR++k+c++rw + RWV83295.1 72 KGPWSPEEDVILSRLVSKFGARNWSLIARGIP-GRSGKSCRLRWCNQ 117 79****************************.*********985 PP
2	Myb_DNA-binding	47.2	5e-15	151	190	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +eEd +++ a++ +G++ W++Iar + gRt++ +k++w++ RWV83295.1 151 EEEDSIIIAAHAIHGNK-WASIARLLE-GRTDNAIKNHWNST 190 7**************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
METKAEAAVD SALPLHPPRH STSSPSSPIL VDDSAGGSSS AAGEGSGADV VMLEGPASGG 60 GGGGATVEDR VKGPWSPEED VILSRLVSKF GARNWSLIAR GIPGRSGKSC RLRWCNQLDP 120 YVKRRPFTGT SSSCLFFGLC SQTFSCMFAA EEEDSIIIAA HAIHGNKWAS IARLLEGRTD 180 NAIKNHWNST LRRRCTEGER HKTCDTPREV STEKNKGPSD ESPLFDNVNS LKSMELRDPS 240 SRENVSDNSG EVVIVRDEPS KPEIKDPPYL FRPIARVSAF SPYTCMSRQP SGLEVARRGQ 300 PDGPLYEALK PGGGICKFLN NISCEPQVPQ RCGHDCCGIQ DKGRSCGSLL GPEFVEFEEP 360 PPISSHELAS VVKDISSIAW LKSGLNGSST IC

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

METKAEAAVD SALPLHPPRH STSSPSSPIL VDDSAGGSSS AAGEGSGADV VMLEGPASGG  60
GGGGATVEDR VKGPWSPEED VILSRLVSKF GARNWSLIAR GIPGRSGKSC RLRWCNQLDP  120
YVKRRPFTGT SSSCLFFGLC SQTFSCMFAA EEEDSIIIAA HAIHGNKWAS IARLLEGRTD  180
NAIKNHWNST LRRRCTEGER HKTCDTPREV STEKNKGPSD ESPLFDNVNS LKSMELRDPS  240
SRENVSDNSG EVVIVRDEPS KPEIKDPPYL FRPIARVSAF SPYTCMSRQP SGLEVARRGQ  300
PDGPLYEALK PGGGICKFLN NISCEPQVPQ RCGHDCCGIQ DKGRSCGSLL GPEFVEFEEP  360
PPISSHELAS VVKDISSIAW LKSGLNGSST IC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	1e-64	MYB family protein