PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83051.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 467aa MW: 52062.4 Da PI: 8.3604

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35.8	2.6e-11	9	49	49	89
FAR1 49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +k+r++ a+ r gCka+l+v ++ d++w+vtkl +eHnHel RWV83051.1 9 KKTRKRAASIREGCKAMLEVIRRGDERWVVTKLMKEHNHEL 49 67899999********************************9 PP
2	FAR1	64	4.3e-20	83	174	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YA++vGF+ r+++s++s ++++ ++ ++vCsk+ +++ +++ + k+ + + ++ gC+a +++ +++ g w+v+kl+leHnHel p RWV83051.1 83 FYYAYASRVGFEARVRQSRRSLHDESLKMLKLVCSKHRYHSGRDNGsdDIKRVQIQDPSKEGCDALFEIIRKDAGIWMVSKLVLEHNHELKP 174 9************************************99998884455666678889****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
REKRIIAGKK TRKRAASIRE GCKAMLEVIR RGDERWVVTK LMKEHNHELG MPSRVHYIAT 60 EGDAVMDPYI GMEFESLELA KTFYYAYASR VGFEARVRQS RRSLHDESLK MLKLVCSKHR 120 YHSGRDNGSD DIKRVQIQDP SKEGCDALFE IIRKDAGIWM VSKLVLEHNH ELKPSLPSKR 180 RRRRRLVHGA LLRLPAAEPR TPPEDGLDGV LGATVQAPFL LRFPRQALPP LSIFLSSVRN 240 ISSVLCSQTS IEATLASEIL LTCDEAVIAA AAAEAVALAR AALELAKDAA QMIGKNLSAE 300 VEKLEESRSE ADIKWLERVS LTETEWAGIT NHPAATETIP LDYNVSLDQS ASTDISSSTF 360 DEPEFQEMQH IENIAVRSGR QIERKARRAR AADKATADVI SLKSGSSGKK KRSAFQEIDY 420 SDPLRYLRGT TNTSKLLTAA EEIELSEGIQ VQTNALEVSS CLLLQMS

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

REKRIIAGKK TRKRAASIRE GCKAMLEVIR RGDERWVVTK LMKEHNHELG MPSRVHYIAT  60
EGDAVMDPYI GMEFESLELA KTFYYAYASR VGFEARVRQS RRSLHDESLK MLKLVCSKHR  120
YHSGRDNGSD DIKRVQIQDP SKEGCDALFE IIRKDAGIWM VSKLVLEHNH ELKPSLPSKR  180
RRRRRLVHGA LLRLPAAEPR TPPEDGLDGV LGATVQAPFL LRFPRQALPP LSIFLSSVRN  240
ISSVLCSQTS IEATLASEIL LTCDEAVIAA AAAEAVALAR AALELAKDAA QMIGKNLSAE  300
VEKLEESRSE ADIKWLERVS LTETEWAGIT NHPAATETIP LDYNVSLDQS ASTDISSSTF  360
DEPEFQEMQH IENIAVRSGR QIERKARRAR AADKATADVI SLKSGSSGKK KRSAFQEIDY  420
SDPLRYLRGT TNTSKLLTAA EEIELSEGIQ VQTNALEVSS CLLLQMS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	184	KRRRRR
2	179	185	KRRRRRR
3	179	186	KRRRRRRL
4	180	185	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	3e-22	FAR1 family protein