PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV82986.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 438aa MW: 48082.9 Da PI: 8.9111

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV82986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	33	55	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++Fs+ L H +H RWV82986.1 33 FECKTCDRRFSSFQALGGHRASH 55 89**********99999998887 PP
2	zf-C2H2	11.8	0.00076	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F L H+r+H RWV82986.1 78 HQCSICGQEFALGQALGGHMRRH 100 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MAHVLMLLSR EGGGGVAESD SLAQSSSSGG RMFECKTCDR RFSSFQALGG HRASHKKPRL 60 VAGDHGRAEA VADKPKVHQC SICGQEFALG QALGGHMRRH KTATEGLVHS LTEKKTGDDR 120 GRIKKEKKKR EKKREKNTSR PLFFPGSPTR SVACGRRIAC PIRRPQAIPS PRMGRRNKAT 180 VMDVRTLSKD NVNGKAVTTS EYASHDAADK LDAYPDMDID TTYSYQKKSS DNSTDLASAR 240 MSTDSAAYKY GSRNSESEIN EPQYDSESLF DFPPLPVTNL FQKNGDDKRE SKKHGDRTSV 300 SEGTAALKAQ RMYSFQINNN VDPTTESDFP SASNSVSYFG SDSQKCVEGT KEKILEKDVV 360 NGLRISDIPE AAMIDKTTTN GLVTKEDRVS ESFYNGCYMS FVPEIFIASM TYHDVVLLHT 420 VRGPCSEAFA LPAVAVAC

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MAHVLMLLSR EGGGGVAESD SLAQSSSSGG RMFECKTCDR RFSSFQALGG HRASHKKPRL  60
VAGDHGRAEA VADKPKVHQC SICGQEFALG QALGGHMRRH KTATEGLVHS LTEKKTGDDR  120
GRIKKEKKKR EKKREKNTSR PLFFPGSPTR SVACGRRIAC PIRRPQAIPS PRMGRRNKAT  180
VMDVRTLSKD NVNGKAVTTS EYASHDAADK LDAYPDMDID TTYSYQKKSS DNSTDLASAR  240
MSTDSAAYKY GSRNSESEIN EPQYDSESLF DFPPLPVTNL FQKNGDDKRE SKKHGDRTSV  300
SEGTAALKAQ RMYSFQINNN VDPTTESDFP SASNSVSYFG SDSQKCVEGT KEKILEKDVV  360
NGLRISDIPE AAMIDKTTTN GLVTKEDRVS ESFYNGCYMS FVPEIFIASM TYHDVVLLHT  420
VRGPCSEAFA LPAVAVAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53600.1	3e-26	C2H2 family protein