PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV82930.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRF

Protein Properties

Length: 430aa MW: 46848 Da PI: 9.5149

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV82930.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.7	2.3e-24	328	372	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e RWV82930.1 328 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRKHVEG 372 79****************************************986 PP
2	QLQ	59.4	1.1e-20	260	296	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+ +L++Q+l+yKyL+an+P+P+ Ll +i++ RWV82930.1 260 GPFTPSQWLELEHQALIYKYLVANVPIPATLLIPIKR 296 59*********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MDLGGMLGMD ALVGASSESG NLFSSSLLSQ ETEVVGRQRG GVFLSSFHKH DRPAEPADCD 60 LRSLKMARSE ALVSASTKAA HFLHRSNSLP LLPDGEQMLS FSSTSKQSDM AVASDGTLPY 120 YNHPSAPSST QCYLRNAGNQ HPAHALDVWL KKAFFWRVWY TDLSCTIGGL GSRQRHGSCE 180 SSARTLEGSA VVVIFKNMFM FSSSSFSCIL LHLLVLSDMV LWFRFAFSHL FLTLFLSSVP 240 ALYSGSSNAN MQGVLARVRG PFTPSQWLEL EHQALIYKYL VANVPIPATL LIPIKRSLGA 300 SGFPPLSAGS FASVGWGPFH LGYSGNADPE PGRCRRTDGK KWRCSRDAVA DQKYCERHIN 360 RGRHRSRKHV EGQTGHAAKP VSVITSSQSA STVPDAISSG SLTNSQQQSK SLQSNITDPF 420 HAQSNRLGNY

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MDLGGMLGMD ALVGASSESG NLFSSSLLSQ ETEVVGRQRG GVFLSSFHKH DRPAEPADCD  60
LRSLKMARSE ALVSASTKAA HFLHRSNSLP LLPDGEQMLS FSSTSKQSDM AVASDGTLPY  120
YNHPSAPSST QCYLRNAGNQ HPAHALDVWL KKAFFWRVWY TDLSCTIGGL GSRQRHGSCE  180
SSARTLEGSA VVVIFKNMFM FSSSSFSCIL LHLLVLSDMV LWFRFAFSHL FLTLFLSSVP  240
ALYSGSSNAN MQGVLARVRG PFTPSQWLEL EHQALIYKYL VANVPIPATL LIPIKRSLGA  300
SGFPPLSAGS FASVGWGPFH LGYSGNADPE PGRCRRTDGK KWRCSRDAVA DQKYCERHIN  360
RGRHRSRKHV EGQTGHAAKP VSVITSSQSA STVPDAISSG SLTNSQQQSK SLQSNITDPF  420
HAQSNRLGNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	7e-54	GRF family protein