PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV82227.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 489aa MW: 52719.2 Da PI: 7.9371

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV82227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.3	2.7e-34	129	225	2	97
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaaks 97 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++++ +++++ +a s+s ++ ++++++ +++++s RWV82227.1 129 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKVAIDQLEELPAWTPTATvTATSKSTFHDPPTASRSPAAEQPS 225 79**************************************************************666664443333333333322222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MPGGVDTINC NVVREKAKEE ENNKCTKNQL PAVAAEEQAS FRRFLTSSTT VSSSISAATA 60 SSSEYAHRSE RMGESQSHRG GLGFHQLAHQ QQQQEQPQQQ AQVHSRFRRL RGVGGEIVEV 120 QGGHILRSTG RKDRHSKVCT AKGPRDRRVR LAAHTAIQFY DVQDRLGYDR PSKAVDWLIK 180 NAKVAIDQLE ELPAWTPTAT VTATSKSTFH DPPTASRSPA AEQPSGQSGK KPVPVAEPDV 240 TTAFSFGDSV GGAGSNSFLP PSLDSDAIAN TIKSFLPMAA GATSTSPASS PPIGFQNYRP 300 DFLGLTGIQN QDLRLSLQSF QDPIFHHVKS SHHHHYQHQH QSPTSSSHNS LLAGSAHLGF 360 DIASAGWAEP NRRTIPWNVA ETNRSGGFGG FAFSTPTPQA LPLHSVLGLS QYFSQREPLQ 420 SSNSASVHSW AEAITPTGEL QMHPVFHPSV SSTGFASEAG FSGLGIPARI QGDEEHDSIS 480 DKLPSASRH

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MPGGVDTINC NVVREKAKEE ENNKCTKNQL PAVAAEEQAS FRRFLTSSTT VSSSISAATA  60
SSSEYAHRSE RMGESQSHRG GLGFHQLAHQ QQQQEQPQQQ AQVHSRFRRL RGVGGEIVEV  120
QGGHILRSTG RKDRHSKVCT AKGPRDRRVR LAAHTAIQFY DVQDRLGYDR PSKAVDWLIK  180
NAKVAIDQLE ELPAWTPTAT VTATSKSTFH DPPTASRSPA AEQPSGQSGK KPVPVAEPDV  240
TTAFSFGDSV GGAGSNSFLP PSLDSDAIAN TIKSFLPMAA GATSTSPASS PPIGFQNYRP  300
DFLGLTGIQN QDLRLSLQSF QDPIFHHVKS SHHHHYQHQH QSPTSSSHNS LLAGSAHLGF  360
DIASAGWAEP NRRTIPWNVA ETNRSGGFGG FAFSTPTPQA LPLHSVLGLS QYFSQREPLQ  420
SSNSASVHSW AEAITPTGEL QMHPVFHPSV SSTGFASEAG FSGLGIPARI QGDEEHDSIS  480
DKLPSASRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	5e-62	TCP family protein