PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV82101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YA | ||||||||
Protein Properties | Length: 222aa MW: 24640.3 Da PI: 8.2582 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.8 | 1.5e-32 | 97 | 153 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e+++kl +k rkpylheSRh hA+rR+Rg+gGrF RWV82101.1 97 EEPVYVNAKQYHGILRRRQSRAKAESKNKL-AKVRKPYLHESRHLHAVRRARGCGGRF 153 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
LPDNSETDEQ QEQVQSEIQH QPSATASLHS GVATHLPGYM VPTSHFDVAQ TVAPAAYPFV 60 DPYYGGMFAA YGGQHVIHPQ LIGVNHLGVP LPTDAIEEPV YVNAKQYHGI LRRRQSRAKA 120 ESKNKLAKVR KPYLHESRHL HAVRRARGCG GRFLNSKSEA DQQNESKENQ QNEVGSNDTA 180 QRFNVRASDE HCANKENTNK LYSNRAEPSK VAKPDKLPVG NE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 4e-51 | NF-YA family protein |