PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV81894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 91aa MW: 10157.5 Da PI: 4.9276 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 54.2 | 4.4e-17 | 2 | 53 | 49 | 100 |
DUF260 49 lpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 lp ++r da+sslvyeA+ar rdPvyG+vg+i+ lq+q++ql+ +la +++e RWV81894.1 2 LPVHQRADAVSSLVYEANARKRDPVYGSVGIIFYLQNQISQLQMQLAFAEAE 53 6889******************************************998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence |
ELPVHQRADA VSSLVYEANA RKRDPVYGSV GIIFYLQNQI SQLQMQLAFA EAEVLCIQMQ 60 QERSLANQHV IDIHEPSSLF CATASPAFLN P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 4e-33 | LBD family protein |