PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV81783.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 250aa MW: 26216.5 Da PI: 7.8134

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV81783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.4	3e-44	25	124	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC++dCv+apyfp +qp+kf vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+ +k+ RWV81783.1 25 PCAACKFLRRKCQPDCVFAPYFPPDQPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVGVISILQHQLRQLQMDLSCAKS 123 7**********************************************************************************************9998 PP DUF260 100 e 100 e RWV81783.1 124 E 124 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MASSSAQLPI SSAASSASLS STSSPCAACK FLRRKCQPDC VFAPYFPPDQ PQKFVHVHRV 60 FGASNVTKLL NELHPYQRED AVNSLAYEAD MRLRDPVYGC VGVISILQHQ LRQLQMDLSC 120 AKSELSKYRS AAAAAAAAET SSASFGETTP VTAATGHGFI NLNHSGITCL GFGRDQFFPA 180 AARDPNHNLQ MMQRNHDADL AARLGANGAY DAGLAAAVNA TSAAAIGLFG GQFSKPSAAG 240 GDERPGIGPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	2e-56	LBD family protein