PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV81744.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | bHLH | ||||||||
Protein Properties | Length: 189aa MW: 20999.3 Da PI: 8.6265 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.7 | 3.3e-06 | 154 | 179 | 6 | 30 |
HHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 6 nerErrRRdriNsafeeLrellPk.a 30 +++Er RR ri +++ +L++l+P+ + RWV81744.1 154 SIAERERRTRISKRLRKLQDLVPNmD 179 689********************944 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
GLSATRAIGN YSQAGTNGIH AYANRRLRSQ WSFSRQDSLS QISELSIPEI GETDTCCNSS 60 DEATGHAGQS YISGDFQLGS WDDDNSIVFT APPSKRAKDN NGDIVTGLSN IDSQFSLPRT 120 SSEMSALEKY LQVQQDSVPC RVRAKRGCAT HPRSIAERER RTRISKRLRK LQDLVPNMDK 180 VKQTQEYLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05805.1 | 5e-42 | bHLH family protein |