PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV81598.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | YABBY | ||||||||
Protein Properties | Length: 97aa MW: 11081.7 Da PI: 9.0564 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 28.2 | 6.2e-09 | 7 | 28 | 5 | 26 |
YABBY 5 ssseqvCyvqCnfCntilavsv 26 +e++ yv+CnfCntilavs+ RWV81598.1 7 IPPEHISYVHCNFCNTILAVSI 28 579*****************98 PP | |||||||
2 | YABBY | 72.6 | 1.4e-22 | 33 | 86 | 118 | 164 |
YABBY 118 PPekrqrvPsaynrfi.......keeiqrikasnPdishreafsaaaknWahfP 164 PekrqrvPsaynrfi +eeiqrika+nP+ish++afs+a kn + f RWV81598.1 33 APEKRQRVPSAYNRFInmsfsicREEIQRIKANNPHISHKQAFSTAGKNVSFFS 86 59*************966666666*************************99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence |
MSSTQVIPPE HISYVHCNFC NTILAVSITL YFAPEKRQRV PSAYNRFINM SFSICREEIQ 60 RIKANNPHIS HKQAFSTAGK NVSFFSSFSM EGCKECK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-18 | YABBY family protein |