PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV81306.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 302aa MW: 34169.2 Da PI: 5.0466 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.3 | 6.3e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +++++G +W++ ++ g+ R++k+c++rw +yl RWV81306.1 16 KGTWTEEEDMKLIAYIHKYGHQNWRALPKLAGLLRCGKSCRLRWTNYL 63 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 43.3 | 8.5e-14 | 69 | 142 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...........................tWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ +++++++lG++ +W++Ia+ ++ gRt++++k+ w+++l RWV81306.1 69 RGNFTRDEEDTIIKLHALLGNKyttlplpsvtwttasccrlshlsrvalRWSKIASFLP-GRTDNEIKNVWNTHL 142 89*********************************************************.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MGRGRAPCCE KIGLNKGTWT EEEDMKLIAY IHKYGHQNWR ALPKLAGLLR CGKSCRLRWT 60 NYLRPDIKRG NFTRDEEDTI IKLHALLGNK YTTLPLPSVT WTTASCCRLS HLSRVALRWS 120 KIASFLPGRT DNEIKNVWNT HLKKRAASGE QQPVTNFGAS TSTGDRMASA IEIPVDPAVD 180 VFGIFDDALS TLMQSNEMED SVFPETLGGR QDSPWTSSQK QSRGPVAPEG TNHPSVPDAG 240 KPEEEACEAE GTRRDGQREE WLDYLEKELG LRDDGEEWDR WDEMEGDMVD SLLRDDSFYP 300 YN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16490.1 | 2e-61 | MYB family protein |