PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV80889.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 288aa MW: 31363.3 Da PI: 7.2953

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV80889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.3	1.3e-43	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++Cv+apyfp +qp kfa+vh++FGasnv+k+l++l++++reda++sl+yeAear+rdPvyG+vg i+ lq++l+ql+++l +k+ RWV80889.1 6 PCAACKFLRRKCTPGCVFAPYFPPDQPTKFAYVHRVFGASNVSKILSDLNPSQREDAANSLAYEAEARLRDPVYGCVGYISFLQHKLKQLQHDLYNAKK 104 7********************************************************************************************999887 PP DUF260 100 e 100 e RWV80889.1 105 E 105 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MSSNSPCAAC KFLRRKCTPG CVFAPYFPPD QPTKFAYVHR VFGASNVSKI LSDLNPSQRE 60 DAANSLAYEA EARLRDPVYG CVGYISFLQH KLKQLQHDLY NAKKELSSYI GPAALGPFLP 120 HHHHQRQHHL VPGPSPSSTA YGIPGMGVEM GLGLAAPGTS QQSQILIREE QQPAMAEAQQ 180 MAMAHVVAAR EQEMMMRRYE QQQELAGYST TGFPDGGRGY NPIGGGAMVA IATEPHPGMD 240 LVPSALSFEG PFPAQHFTGQ HHPHQQQMQP EHHRTGSDEG RSGIGPSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	3e-56	LBD family protein