PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV80849.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB_related

Protein Properties

Length: 427aa MW: 46441.9 Da PI: 6.6355

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV80849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	6.1e-16	14	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ + R++k+c++rw +yl RWV80849.1 14 KGLWSPEEDEKLIKHITEFGHGCWSSVPKQAVsgLQRCGKSCRLRWINYL 63 678*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MGGHSCCYKQ KLRKGLWSPE EDEKLIKHIT EFGHGCWSSV PKQAVSGLQR CGKSCRLRWI 60 NYLRPDLKRG TFSQQEEDLI IELHAVLGNR YHPLVFSLSQ AFGFSDTYLP VPGRIKNFWN 120 SCIKKMLKQR GIDPNTHKPL AEVDGGGDDK APDNSEKNSG SGGLHLPVTP ALAIANQRPT 180 VDKSMDESTT SKSSATPTKE IFLDQFLANH ESSSTCRSPN PMGSFPLPLL SFAPDYSSSL 240 ATSAALPFSS NPLLWLNQTP RQHDATPELS CNAISAAVSS LSTSAIAPPS CAGDSTISNW 300 YAANCNNSPR SSVNDSGGFM LQSSCSFDSG IFPWSELTPD KDVQVQLGGE TEDLKWSEYL 360 HGAFPASAAV QAHQSSQPLY GDIKGGSQFT ISGLSIWQQN QQLQHQLQAP DISGKDFQSV 420 SVGFQQI

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MGGHSCCYKQ KLRKGLWSPE EDEKLIKHIT EFGHGCWSSV PKQAVSGLQR CGKSCRLRWI  60
NYLRPDLKRG TFSQQEEDLI IELHAVLGNR YHPLVFSLSQ AFGFSDTYLP VPGRIKNFWN  120
SCIKKMLKQR GIDPNTHKPL AEVDGGGDDK APDNSEKNSG SGGLHLPVTP ALAIANQRPT  180
VDKSMDESTT SKSSATPTKE IFLDQFLANH ESSSTCRSPN PMGSFPLPLL SFAPDYSSSL  240
ATSAALPFSS NPLLWLNQTP RQHDATPELS CNAISAAVSS LSTSAIAPPS CAGDSTISNW  300
YAANCNNSPR SSVNDSGGFM LQSSCSFDSG IFPWSELTPD KDVQVQLGGE TEDLKWSEYL  360
HGAFPASAAV QAHQSSQPLY GDIKGGSQFT ISGLSIWQQN QQLQHQLQAP DISGKDFQSV  420
SVGFQQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	2e-70	MYB family protein