PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV80782.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WOX | ||||||||
Protein Properties | Length: 207aa MW: 23727.4 Da PI: 7.0241 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 68.2 | 1e-21 | 22 | 82 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le++F++ n +ps++++++++++l +++e++V++WFqNrRa+ k+ RWV80782.1 22 RQRWTPTSMQLQILETMFNQgNGTPSKQKIKQITTELsqhgQISESNVYNWFQNRRARSKR 82 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 102.5 | 3e-33 | 21 | 84 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++it+eL+++G+i++ NV++WFQNr+aR+++k+ RWV80782.1 21 ARQRWTPTSMQLQILETMFNQGNGTPSKQKIKQITTELSQHGQISESNVYNWFQNRRARSKRKK 84 789***********************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MRLGGLYNDS LMASGGHKIT ARQRWTPTSM QLQILETMFN QGNGTPSKQK IKQITTELSQ 60 HGQISESNVY NWFQNRRARS KRKKMAALPS NTESEAEADE ESPDEKKPRP DEFHHENLPN 120 SISNHPIYDE QMNAEAHLLA SEINQTQGRC RLNESLKSYG GLDHMSYESV LSTPSRFLHH 180 YFPSFLPSYQ SVFFDLIDQC RIRPPDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 1e-36 | WOX family protein |