PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV80277.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 348aa MW: 37983.3 Da PI: 4.9911 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 45.2 | 1.9e-14 | 175 | 218 | 18 | 58 |
-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 18 sefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 s r+YYrCt++ gC+++k+v+rs+edp v+++tY g+H++ RWV80277.1 175 SSSCRAYYRCTHRssqGCQATKQVQRSDEDPLVFDVTYLGTHTC 218 5678********98899*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MENDGTSSEL RSTLMAELAR ALELVSELQS HLDHPSAAEL CKSLATEILS SIGKSILMAK 60 SGDPDGELQA GDSPRSENSS PAFRDPGRRD LMKKRCAFDS LFSKSSDFSV TRSCSDESKA 120 PWMTAIAGES TGRRISWEPS IRGQDSNPAA AKFEIHDKLL LCSHRHPCVY VRACSSSCRA 180 YYRCTHRSSQ GCQATKQVQR SDEDPLVFDV TYLGTHTCLQ RPQKTPTSAC LGHQSSYTLE 240 MEGVHYEEEA RLLTSLSFGS MAVMGDTTAD LFSSLSSPPA FSSPYQISSF DGGMKLQTSD 300 SDIAELISRG DSASNSSLVD MASMLQEMDF AHNFQFDAPG FDSCSFFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 1e-16 | WRKY family protein |