PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV80229.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | SBP | ||||||||
Protein Properties | Length: 238aa MW: 25405.7 Da PI: 8.5612 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 78 | 1.4e-24 | 63 | 112 | 1 | 50 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfh 50 +CqvegC++dl+ ak yh rhkvC vhsk+p+v+v+g+eqrfCqqCsrf RWV80229.1 63 RCQVEGCSVDLTGAKAYHCRHKVCGVHSKSPKVTVAGMEQRFCQQCSRFR 112 6************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MNTKCSNAAS RACGSTDSTQ GLKIGRKTYF EDVSSSSFPV APPAPQKKGK GVVQVGKQQP 60 PPRCQVEGCS VDLTGAKAYH CRHKVCGVHS KSPKVTVAGM EQRFCQQCSR FRGFLVDLTH 120 SKLPSILQNP WQIDPSGLGA ASAPGIPHPT AGSDSSSALS LLSAQPWGST LVADCTTSYR 180 GCNRSSTSFE VRLNQVGEPD DGHFAGEIEL VPQGKRQCMG VDPSMRCRLS DDAIHWTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 8e-25 | SBP family protein |