PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV80098.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 350aa MW: 38687 Da PI: 7.9592 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.2e-18 | 19 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G + +W+ ++ g++R++k+c++rw +yl RWV80098.1 19 KGPWTPEEDKKLVEYIQLHGHRrSWRELPKNAGLNRCGKSCRLRWTNYL 67 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.9e-17 | 73 | 118 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ l+v+++ lG++ W++I+ +++ gRt++++k++w+++l RWV80098.1 73 RGKFSEEEEGLIVQLHSALGNK-WSKISTHLP-GRTDNEIKNYWNTHL 118 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
LLRKTMGRSP CCDEIHVKKG PWTPEEDKKL VEYIQLHGHR RSWRELPKNA GLNRCGKSCR 60 LRWTNYLRPD IKRGKFSEEE EGLIVQLHSA LGNKWSKIST HLPGRTDNEI KNYWNTHLRK 120 KLLRVGIDPV THQRTTDLDL LSRLPNLLAA TAKLGNLDNA LRLHADAVAR YQMLKGLITL 180 MTPSVLPPNT DAMNRLGLLA SPGRYDLLQQ NDQLEGLVNG SLAFGQDQML PTTPGLLGLV 240 NPNTPSSSHA SPVSRIPHEM MMMMMMKSSY DGSSTLTDSN TGITTPGFSS LDMPAAHSTP 300 SSVSSVSPEN EAADFVQGAC GTNASTPSQG WQGLNLGEPD EDFSWKDILE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 4e-76 | MYB family protein |