PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV79908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 218aa MW: 24076.9 Da PI: 8.4646 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.1 | 2.1e-29 | 55 | 112 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++p sYY+Ct+ gCpv+k+ver+++d + v++tYeg+H h+ RWV79908.1 55 LDDGYRWRKYGQKVVKGNPNP-SYYKCTTVGCPVRKHVERASHDLRSVITTYEGKHIHD 112 59*******************.9**********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MDWDGVCWID DGSERTARCS RRKAEGESEG LSAAGNRTVR EPRVVVQTQS DIDILDDGYR 60 WRKYGQKVVK GNPNPSYYKC TTVGCPVRKH VERASHDLRS VITTYEGKHI HDVPAARGSG 120 GGAHLLARPQ PENNGGMAAA IRPSVMANPN YVFRGRPGAS ESQAPFKLEM LQSTGAGYGF 180 SGYQNSMNGF MNQQQQQMFP GKTKEEQKED SFLDSLLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 3e-59 | WRKY family protein |