PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV79851.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

CO-like

Protein Properties

Length: 415aa MW: 45452.3 Da PI: 6.6927

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV79851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	27.6	6e-09	18	61	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + + +++fCe ++ +lC++C + H+ H++v RWV79851.1 18 ARACDSCLRRLARWFCEADDAFLCQSCDASVHSAnplarrHRRV 61 578*****************************667888888877 PP
2	CCT	69.6	8.2e-24	362	405	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvkqa RWV79851.1 362 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKQA 405 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MSYAEKQRTA GVVAARTARA CDSCLRRLAR WFCEADDAFL CQSCDASVHS ANPLARRHRR 60 VRLHTASCSS PPTDDASDDH SMPPWLHGFK RKPRTPRGKP GRAVAAAKVE TLVPDLEAMS 120 AEENQSNEEE QLLHCVPTLD PLLIGFCPQH PLDDGSPCED DVKPALQLPD FAHVSAADGL 180 AGFRPSDLDL SEFASDMEAL LGRGLDDHSF CIDGLGLADA TLEDDGMEHV KVEDGDAACG 240 FGVEIALSND VMDLDYDGRT ATMAVQVKDH KPSQEAAAKR RTILRLDYEA VIAAWSSNGC 300 SPWTDGKRPQ FHPSDAWADF LRVIRPLLRA GILSQVAGAG GGGEVQGMYQ QAGHMAVVDG 360 GREARVSRYR EKRRTRLFSK KIRYEVRKLN AEKRPRMKGR FVKQAAFPAA ALTFS

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MSYAEKQRTA GVVAARTARA CDSCLRRLAR WFCEADDAFL CQSCDASVHS ANPLARRHRR  60
VRLHTASCSS PPTDDASDDH SMPPWLHGFK RKPRTPRGKP GRAVAAAKVE TLVPDLEAMS  120
AEENQSNEEE QLLHCVPTLD PLLIGFCPQH PLDDGSPCED DVKPALQLPD FAHVSAADGL  180
AGFRPSDLDL SEFASDMEAL LGRGLDDHSF CIDGLGLADA TLEDDGMEHV KVEDGDAACG  240
FGVEIALSND VMDLDYDGRT ATMAVQVKDH KPSQEAAAKR RTILRLDYEA VIAAWSSNGC  300
SPWTDGKRPQ FHPSDAWADF LRVIRPLLRA GILSQVAGAG GGGEVQGMYQ QAGHMAVVDG  360
GREARVSRYR EKRRTRLFSK KIRYEVRKLN AEKRPRMKGR FVKQAAFPAA ALTFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	373	389	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	7e-67	CO-like family protein