PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV79326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YA | ||||||||
Protein Properties | Length: 208aa MW: 23180.1 Da PI: 9.5742 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.4 | 4.2e-32 | 38 | 94 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVN+KQy++I++RRq+Rak+e e+k+ k rkpylheSRh hA+rR+Rg+gGrF RWV79326.1 38 EEPVYVNPKQYHGIIRRRQSRAKAELERKV-MKVRKPYLHESRHLHAMRRARGCGGRF 94 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
CQYLVAYPLL ALWYTPQVHP QVFGMSQSRM LLPLEMTEEP VYVNPKQYHG IIRRRQSRAK 60 AELERKVMKV RKPYLHESRH LHAMRRARGC GGRFLNTKKT DEDAAKTDTK KGLNSGAFLS 120 TQSTISSSSE AMPSDCSGDT NPASTMQEPT SKSQTSISRK DGYQDQSESE ISFLHLKSGD 180 KAEDDDCSGP RSGGILVNRP SSRAVAIQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 4e-38 | NF-YA family protein |