PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWV79140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 292aa MW: 31957.9 Da PI: 6.7988 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.8 | 4.7e-33 | 151 | 208 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgynWrKYGqK+vkg e+prsYY+Ct+++Cpvkkkvers d++v+ei+Y+g+Hnh+ RWV79140.1 151 VDDGYNWRKYGQKQVKGGEYPRSYYKCTHQKCPVKKKVERSF-DGQVTEIVYKGQHNHQ 208 59****************************************.***************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
YEARRESGGG ANEVALSLGH SRPVNLTATR PPLITFPSGI SPSSLFQSPP SLFSTVQVSG 60 QYGILNQQNQ PQVTVQDAQS HAYDPTSYSS TLSAAPATTA AASLRHLPTP FNLSSAQQMP 120 HIPLSTYNSA TESAYGDRRS QPSTLVVDKP VDDGYNWRKY GQKQVKGGEY PRSYYKCTHQ 180 KCPVKKKVER SFDGQVTEIV YKGQHNHQPP QQNRHAKEGG SLASGSNDSK PEPASQGLYE 240 SSNKLSETTY KRNLESDHDS TKYLSDSSDD EEAGETAMMT GELDENQPDL KR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.1 | 4e-40 | WRKY family protein |