PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV78464.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB_related

Protein Properties

Length: 459aa MW: 51176.6 Da PI: 6.0327

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV78464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	13	71	1	46
TSSS-HHHHHHHHHHHHHTTTT..............-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..............tWktIartmgkgRtlkqcksrwqk 46 rg W++eEde+lv++++ +G +W+ Ia++++ gRt++++k++w++ RWV78464.1 13 RGLWSPEEDEKLVKYITSHGHScwstvksvpslpvfRWAQIAKHLP-GRTDNEVKNFWNS 71 788***************99********************.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MGHPCCSKQK VKRGLWSPEE DEKLVKYITS HGHSCWSTVK SVPSLPVFRW AQIAKHLPGR 60 TDNEVKNFWN SCIKKKLISQ GLDPTTHNLF PSSRPANGSI NSDELSQLHH TRSPTTPFTI 120 SPPIRSHDRM KRPMELNPPL ETPPHASAVP LHETAPVPNF QYQDDHVLMS FKDHSSHDFI 180 NASSSSSSLD HTNMSSSSFH EPGFIDDCMW DDSTVEPLEA LQRAADPVQV QPTMCRMGVD 240 EESEKGMVME TSYGSATLDL EMMENAFCKA AELRQCAPAV LSGCEEDDLR RGVLLLHLDR 300 LKAVEICGSR SRGHVEVLIW ENDGSADMQD LLIVFAPPQE AHKQRIPIKK VEDHYSRNVT 360 YSKRRKGSIR QVCATPGSEV AVIAPSPVGH PLAFGHPSVD VDLCHFLPGQ LQREPDLEEL 420 QRRAEKPEKL MVAKIDNDAS ESSGGSVPED PQREEVVEN

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MGHPCCSKQK VKRGLWSPEE DEKLVKYITS HGHSCWSTVK SVPSLPVFRW AQIAKHLPGR  60
TDNEVKNFWN SCIKKKLISQ GLDPTTHNLF PSSRPANGSI NSDELSQLHH TRSPTTPFTI  120
SPPIRSHDRM KRPMELNPPL ETPPHASAVP LHETAPVPNF QYQDDHVLMS FKDHSSHDFI  180
NASSSSSSLD HTNMSSSSFH EPGFIDDCMW DDSTVEPLEA LQRAADPVQV QPTMCRMGVD  240
EESEKGMVME TSYGSATLDL EMMENAFCKA AELRQCAPAV LSGCEEDDLR RGVLLLHLDR  300
LKAVEICGSR SRGHVEVLIW ENDGSADMQD LLIVFAPPQE AHKQRIPIKK VEDHYSRNVT  360
YSKRRKGSIR QVCATPGSEV AVIAPSPVGH PLAFGHPSVD VDLCHFLPGQ LQREPDLEEL  420
QRRAEKPEKL MVAKIDNDAS ESSGGSVPED PQREEVVEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	4e-40	MYB family protein