PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV78297.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 302aa    MW: 34127.4 Da    PI: 7.2456
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV78297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH253.3e-08107129426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C+ f+r+G C++Gd C  aHg
  RWV78297.1 107 AVCPEFRRSGSCPRGDACELAHG 129
                 78****************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MANIGCADQR HHLLCEKKAL SDLDLPHRKH LQRPRLSVLL PEVEDDSGDG AVDEVVDVYS  60
SDEFRMYEFK VRRCMRGRSH DWTDCPFAHP GEKARRRDPR RYHYSGAVCP EFRRSGSCPR  120
GDACELAHGV FECWLHPARY RTMPCKDGRR CRRKVCFFAH FPRQLRILPS HKDDETNYSP  180
SCYGFCSAND NSAAASGFSP TSTLMSFSPP ISPSAGEMHY DSKQMNFGLI NRYNADRVID  240
YDVVCEELMN SLDAMELSAS PATSPAAAGP TKARDQRAVK SGNSSSSSMC WPDLEWVNEL  300
LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.11e-66C3H family protein