PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV78222.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 432aa    MW: 48575.9 Da    PI: 7.7822
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV78222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.38.7e-06234256426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C++f+r G C++Gd C  aHg
  RWV78222.1 234 VVCPDFRRCGSCSRGDDCELAHG 256
                 68****************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MHACMRTSTH HYVRTRTHLH HATVAIAGVS CHAKWRPPPR TARRLYGLGT QSSPPTYSSL  60
LSSSTAGSPN SEAEHISYVV RLAVARHLLA FHVVPLHGKP KASPLRYYYP PLQIEPSDSL  120
KRLLSMANIV CAERHRLCCE KRALVSLDLP PRKLLQHPGL SVVLPEEEDE EDDGGEGSVD  180
EEVDVYSSDE FRMYEFKVRR CMRGRSHDWT DCPFAHPGEK ARRRDPRRHH YSGVVCPDFR  240
RCGSCSRGDD CELAHGVFEC WLHPARYRTM PCKDGRRCRR KVCFFAHFPR QLRVLPSHSN  300
NDEKHSVPCY GFWSANDNSV AAAAFSPTST LMSFSPPISP SVEELQLSGN DIKQKNMRFN  360
NRNNNPNGVM DYDGLCEELM NSLEAMELSA SPVTSSAAAA APMEVRSLGL ESNSSSSSVC  420
WPDLDWVNEL LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.14e-62C3H family protein