PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV78037.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 281aa    MW: 30179 Da    PI: 8.0688
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV78037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260811.8e-252119199
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeer..............edamsslvyeAearardPvyGavgvi 80 
                 +C++C+vlr++C++dC ++ ++     p++q++++ +++k++G++ +++l++a p++ r               ++++sl+yeA+ r+ +P+yG+vg++
  RWV78037.1   2 SCNGCRVLRKGCSDDCSIRSCLqwiksPESQANATVFLAKFYGRAGLMNLINAGPDHLRpgrynyrlkhpwnlAAIFRSLLYEACGRIVNPIYGSVGLL 100
                 6*********************************************************99*************************************** PP

      DUF260  81 lklqqqleqlkaelallke 99 
                 l++++ql q+++e++l ++
  RWV78037.1 101 LSGSWQLTQAAVEAVLKGA 119
                 ************9998766 PP

Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MSCNGCRVLR KGCSDDCSIR SCLQWIKSPE SQANATVFLA KFYGRAGLMN LINAGPDHLR  60
PGRYNYRLKH PWNLAAIFRS LLYEACGRIV NPIYGSVGLL LSGSWQLTQA AVEAVLKGAP  120
IVQIPSETAA STPTPPLKAY DIRHVSKDPG PGGWARAAAE LHQINKAGSR FKRSGAKSAR  180
PAAIHPPEFH EYTGSDSTEP AADAGVGGRG DEECQVEESM WSDDIAEEAS HVSQGEPYRA  240
EEDGEVGLEL TLGLGPVASR RGAARPRPGR VHDRSRPGVV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.12e-71LBD family protein