PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV77029.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GATA
Protein Properties Length: 336aa    MW: 35464 Da    PI: 4.8995
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV77029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.76.8e-18236270135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  RWV77029.1 236 CTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 270
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAWEWEMTLG VELGMEMGVS SSTTSAAVAQ LEGTASPACL SGAPTAPDTV RDDDVLDFSG  60
HHSFPDFGTA AATDVQFFAP TNPLSADASQ PLPAETNSSS DFQCLQASFD FYIPEAELEW  120
LSQFVEDSFS DVPCQYTTLA APSDDNQPRV DQCISSRAAR SKRSRTSNPS AVWSSLTPPP  180
QPSPSSSSSS SDLPSSQPTS FGAKSISSKG SSSSSSGGKK GGGGEGGGEG GGMRRCTHCA  240
SEKTPQWRTG PLGPKTLCNA CGVRYKSGRL VPEYRPAASP TFVLTQHSNS HRKVMELRRQ  300
KEFLCLRHEN QPSPSSSSAA AAATLPELLL DDYSVC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1217224GGKKGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.14e-45GATA family protein