PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022777385.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 476aa MW: 52204.9 Da PI: 6.1109

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022777385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.7	1.3e-05	367	404	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_022777385.1 367 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 404 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MAEEFHAGIC EGAWWNSSKP MFKGCSSPCS MGISDFGSFG WGTDMVDIKA RSCEESTNNS 60 ISDHSSIVFQ GHAHQKPQQA DSDSGGGSIL IDSTLQMMGF GLSSSATSDW NQSLLRSNGR 120 TEGYNSTLQE DINSRLSCRQ ETGMDFSQIQ KVWSQKSYTS PGEDSSITTF KPINQDFSLE 180 QQRLNSVTSS GNSAPTCQGL SSGFPIGSAS YGYPSTLLQS LFEPDPQTQQ QSLFNNRSIN 240 YLSSAAATYG ANANEFSPSW PKLTPFIRPP LAKQQPSSLH FSNNTPFWNA SATGVNDDKA 300 SFLHSPQSQF LVQTFDEKPN CPSMTTKTNN TEEIQNPGSV MKKGISEPPF KRPRIETPST 360 LPTFKVRKEK LGDRITALQQ LVSPFGKTDT ASVLHEAIEY IKFLHDQVNV LSTPYMKQAA 420 ASIQQQQSTD KLKDPEGPKQ DLRSRGLCLV PISSTFPVAN ETTVDFWTPT FGGSFR

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MAEEFHAGIC EGAWWNSSKP MFKGCSSPCS MGISDFGSFG WGTDMVDIKA RSCEESTNNS  60
ISDHSSIVFQ GHAHQKPQQA DSDSGGGSIL IDSTLQMMGF GLSSSATSDW NQSLLRSNGR  120
TEGYNSTLQE DINSRLSCRQ ETGMDFSQIQ KVWSQKSYTS PGEDSSITTF KPINQDFSLE  180
QQRLNSVTSS GNSAPTCQGL SSGFPIGSAS YGYPSTLLQS LFEPDPQTQQ QSLFNNRSIN  240
YLSSAAATYG ANANEFSPSW PKLTPFIRPP LAKQQPSSLH FSNNTPFWNA SATGVNDDKA  300
SFLHSPQSQF LVQTFDEKPN CPSMTTKTNN TEEIQNPGSV MKKGISEPPF KRPRIETPST  360
LPTFKVRKEK LGDRITALQQ LVSPFGKTDT ASVLHEAIEY IKFLHDQVNV LSTPYMKQAA  420
ASIQQQQSTD KLKDPEGPKQ DLRSRGLCLV PISSTFPVAN ETTVDFWTPT FGGSFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	2e-59	bHLH family protein