PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022777228.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 583aa    MW: 64305.5 Da    PI: 7.28
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022777228.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.91.6e-15261320155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  XP_022777228.1 261 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 320
                     78*******************655454478446*************************98 PP

2AP248.13e-15363414155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  XP_022777228.1 363 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 414
                     78****************988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    
MSNWLGFSLT PHLRIDGSFG REDHGGFSSV MPLRSDGSLC VADPFRHSSN GNEDWRYENG  60
IGGASASKEG PKLEDFLGCC YSNSPSEEAK AYCQTQVDQN RNSVPTRINV NVAPSFNSKG  120
EMDPAETFTH PSSLIQTYHY NENPQTLMAS DHSLQQCDPN PTHNQNNGMY HVPFESATSV  180
SGFKSWLRQT PFSGGKGSGN EASNNCNFQT LSLTMSPTSQ NGLAAIAPLE VADTRKRPVG  240
KTLAREPVPR KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCRKEGQT RKGRQVYLGG  300
YDKEEKAARA YDLAALKYWG PTTHINFPLS TYEKELEEMK NMTRQEFVAH LRRKSSGFSR  360
GASVYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGTSAVTN  420
FDISRYDVKR ICSSSTLIGG DHAKRSPKDS APIAPEDYNS RASPTSAQPL LAISSGEASD  480
ELADMVWSAN SDDQQQHQNT NTNNDASLAT SSSRNPSNPQ SPKCSVGLAS DQFGIGGDYS  540
QGYFPLQGPK YEDGNNGTEN SNENRLGNLG LVHQVSIFAL WNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-144AP2 family protein