PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022777228.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 583aa MW: 64305.5 Da PI: 7.28 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.9 | 1.6e-15 | 261 | 320 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022777228.1 261 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 320 78*******************655454478446*************************98 PP | |||||||
2 | AP2 | 48.1 | 3e-15 | 363 | 414 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022777228.1 363 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 414 78****************988532...5************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 583 aa Download sequence |
MSNWLGFSLT PHLRIDGSFG REDHGGFSSV MPLRSDGSLC VADPFRHSSN GNEDWRYENG 60 IGGASASKEG PKLEDFLGCC YSNSPSEEAK AYCQTQVDQN RNSVPTRINV NVAPSFNSKG 120 EMDPAETFTH PSSLIQTYHY NENPQTLMAS DHSLQQCDPN PTHNQNNGMY HVPFESATSV 180 SGFKSWLRQT PFSGGKGSGN EASNNCNFQT LSLTMSPTSQ NGLAAIAPLE VADTRKRPVG 240 KTLAREPVPR KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCRKEGQT RKGRQVYLGG 300 YDKEEKAARA YDLAALKYWG PTTHINFPLS TYEKELEEMK NMTRQEFVAH LRRKSSGFSR 360 GASVYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGTSAVTN 420 FDISRYDVKR ICSSSTLIGG DHAKRSPKDS APIAPEDYNS RASPTSAQPL LAISSGEASD 480 ELADMVWSAN SDDQQQHQNT NTNNDASLAT SSSRNPSNPQ SPKCSVGLAS DQFGIGGDYS 540 QGYFPLQGPK YEDGNNGTEN SNENRLGNLG LVHQVSIFAL WNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-144 | AP2 family protein |