PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022777211.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 476aa MW: 52168.6 Da PI: 5.3289

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022777211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.1	6.7e-08	381	421	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_022777211.1 381 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 421 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MDGLEWDGSE VVANSLPVWN GRRNDIEDSF LVSNSNSSVY GGKMDLLEDI FSPIHELQKT 60 QPSCVNPDSD IVSEMVPHPA SELDSVNVAL NLYMLQCQGV RLATDTNLLK SAYWGDALTQ 120 ELCTPPPLNR AYGLCTLNAS IPDIGMEVHS QVIKGLRNGK AGSTTTGALE SLDCLLSAAN 180 SNTDTSVEDD GISMIFSDCK NLWNFAASSA VSSGESENNG LNMGSKDFNC PVNELDETVS 240 QSSSDHPYIN NCKLSQTKPS SSKSGNDQSE FKVGLNCCYL NLLQTDSSAI ERGFRLIPEN 300 PPKAKKARSE KRTTSSNINF QQPSSSVSSS IEEPDPEAIA QMKEMIYRAA AFRPVNLGLE 360 VVEKPKRKNV RISTDPQTVA ARQRRERISE RIRVLQRLVP GGSKMDTASM LDEAANYLKF 420 LRSQVKALEN LGHKLDPMNC PPTNLAFSSL PVNHSLPMQK HNFPLLDPNH IHHPQS

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MDGLEWDGSE VVANSLPVWN GRRNDIEDSF LVSNSNSSVY GGKMDLLEDI FSPIHELQKT  60
QPSCVNPDSD IVSEMVPHPA SELDSVNVAL NLYMLQCQGV RLATDTNLLK SAYWGDALTQ  120
ELCTPPPLNR AYGLCTLNAS IPDIGMEVHS QVIKGLRNGK AGSTTTGALE SLDCLLSAAN  180
SNTDTSVEDD GISMIFSDCK NLWNFAASSA VSSGESENNG LNMGSKDFNC PVNELDETVS  240
QSSSDHPYIN NCKLSQTKPS SSKSGNDQSE FKVGLNCCYL NLLQTDSSAI ERGFRLIPEN  300
PPKAKKARSE KRTTSSNINF QQPSSSVSSS IEEPDPEAIA QMKEMIYRAA AFRPVNLGLE  360
VVEKPKRKNV RISTDPQTVA ARQRRERISE RIRVLQRLVP GGSKMDTASM LDEAANYLKF  420
LRSQVKALEN LGHKLDPMNC PPTNLAFSSL PVNHSLPMQK HNFPLLDPNH IHHPQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	382	387	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	2e-73	bHLH family protein