PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022777182.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 312aa MW: 33912.6 Da PI: 6.028 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12 | 0.00039 | 193 | 231 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq XP_022777182.1 193 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 231 6677889999999999998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MMAGNPSWWS MHLHPPSPSP SLFPPPYALG SSTLPPNSLP DNQELPQSWS QLLLGGLSGE 60 EERFGPSHHF QPKKLENWEN QILNPSARVP VVDVKQEVTQ NSNLYGHGDD EFQASRPASA 120 AWSQIMPISS PRSCITSLSS NMLDFSFNKA TDHGSNTQPV DHSSEQCNST ATGGVCKKAR 180 VQPSSSQPPL KVRKEKLGDR ITALHQLVSP FGKTDTASVL LEAIGYIRFL QGQIEALSSP 240 YLGTASSNMR NQQSVHGERN CAFPEEQGQD NQDEPKDLRS RGLCLVPVSC TQQVGSDNSA 300 DYWAPAFGGG GF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 1e-72 | bHLH family protein |