PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022776840.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 349aa    MW: 39178.6 Da    PI: 7.8212
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022776840.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF657.7e-211053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + en+  rq tf+kR++gi+KKA+ELS+LCd+e+ +++fs+t+k
  XP_022776840.1 10 KLENTNGRQATFAKRKHGIMKKANELSILCDVEIILLMFSPTNK 53
                    6799*************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MGRVKLKIKK LENTNGRQAT FAKRKHGIMK KANELSILCD VEIILLMFSP TNKPSLCIGK  60
RSIEEIIEKF AQLTPQERAK RKLESLEALK KTFKKLDHDV NIHEFLGTST QTIEDLTNQA  120
RLLQTQLSEI LRRLSCWTNT VKINNVEHLR QMEDSLKEYL NQIQVHKENL GKQQLLSLEC  180
TSQLQNKMHV PLGMSIEQQL QHLAWMPNND RRHMALSEDP NLIPLRDVEC SASSSFGSYS  240
GYFGTAKNSE LSSSGQENGI LNNLSGNASS QLQLGGQCPF SYNLNILNDP IFPPVAGMNF  300
QETPADYHVN GALEGPRAGY DTTQGSWAST SGPCAVAMFD EPLYSRQLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.23e-99M-type_MADS family protein