PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022776839.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 350aa    MW: 39265.7 Da    PI: 7.8212
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022776839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF657.7e-211053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + en+  rq tf+kR++gi+KKA+ELS+LCd+e+ +++fs+t+k
  XP_022776839.1 10 KLENTNGRQATFAKRKHGIMKKANELSILCDVEIILLMFSPTNK 53
                    6799*************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MGRVKLKIKK LENTNGRQAT FAKRKHGIMK KANELSILCD VEIILLMFSP TNKPSLCIGK  60
RSSIEEIIEK FAQLTPQERA KRKLESLEAL KKTFKKLDHD VNIHEFLGTS TQTIEDLTNQ  120
ARLLQTQLSE ILRRLSCWTN TVKINNVEHL RQMEDSLKEY LNQIQVHKEN LGKQQLLSLE  180
CTSQLQNKMH VPLGMSIEQQ LQHLAWMPNN DRRHMALSED PNLIPLRDVE CSASSSFGSY  240
SGYFGTAKNS ELSSSGQENG ILNNLSGNAS SQLQLGGQCP FSYNLNILND PIFPPVAGMN  300
FQETPADYHV NGALEGPRAG YDTTQGSWAS TSGPCAVAMF DEPLYSRQLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.21e-101M-type_MADS family protein