PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776708.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 245aa MW: 28509.4 Da PI: 8.6766

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776708.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.6	2.2e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gk++eys+ XP_022776708.1 9 KRIENKINRQVTFSKRRGGLLKKAHEISVLCDAEVALIVFSHKGKVFEYST 59 79***********************************************96 PP
2	K-box	110.7	1.5e-36	78	174	4	100
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ +++e++ + +++ e+++Lk+++e Lq++qRh++GedL+sLslkeLq+LeqqL+++lk+iRskKn+l++e+i++lq+ke+++qe+n++L k++ XP_022776708.1 78 TRLVATESEYQGNWSMEYNRLKAKVELLQKNQRHYMGEDLDSLSLKELQNLEQQLDTALKHIRSKKNQLMYESISQLQRKERAIQEQNTMLAKQI 172 556667788889**********************************************************************************9 PP K-box 99 ee 100 +e XP_022776708.1 173 KE 174 87 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MGRGRVQLKR IENKINRQVT FSKRRGGLLK KAHEISVLCD AEVALIVFSH KGKVFEYSTD 60 SSMDKILERY ERYSYAETRL VATESEYQGN WSMEYNRLKA KVELLQKNQR HYMGEDLDSL 120 SLKELQNLEQ QLDTALKHIR SKKNQLMYES ISQLQRKERA IQEQNTMLAK QIKEREKTVA 180 QQSQWAQQNH GLNTSSFLLP EPHPCLNIGL HCSGTYQEEA TEVRRNELDL TLEPIYSCHL 240 GCFAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69120.1	1e-124	MIKC_MADS family protein