PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022776518.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 580aa    MW: 61965.7 Da    PI: 9.5738
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022776518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-057193123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C+ C+k F r  nL+ H r H
  XP_022776518.1 71 FICEVCNKGFQREQNLQLHRRGH 93
                    89*******************88 PP

2zf-C2H213.10.00028147169123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC++C+k++  +s+ k H +t+
  XP_022776518.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169
                     58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    
MAASSSSTPF FGTREDNQNQ MIQQLSSTTP TSSTAPTAAP QKKKRNQPGT PNPDAEVIAL  60
SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEVKRK VYLCPEPTCV  120
HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT  180
LFSRRDSFIT HRAFCDALAQ ESARHPTNFS TIGSHHLFGS NHMSLGLSQV GSQIPSLQDQ  240
NQPSINILRL GSAGAAKFEH LIPPSNPSSL QNMPTSAFFM PDAANQGFHQ DHQSHHGHGS  300
YLNKPLHGLM QLPDLQGNTN NPAAPANLFN LGFFSNNSAA SSISTSENAG ASANLPNSGF  360
LGSNQFNSGN AGGSGQGTGM FTTSMGDQVG SGLSSLYSTS MQHENISPHM SATALLQKAA  420
QMGSTTSSNT SSLLRGLGSS SSSGTKSDRP VLSANFGSNF GGGSSVTETL RSQMENDSNL  480
QGLMNSLANG NSSIFGAGHG QDHSNFGGFS GSGMTIEQQN NNANFCNVNE AKLTLDFLGV  540
GGMVRNIGGR QHGINISSLD PDVKSSAQAA TQHFGSAKLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02080.11e-126C2H2 family protein