PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022776518.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 580aa MW: 61965.7 Da PI: 9.5738 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.2 | 3e-05 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022776518.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00028 | 147 | 169 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022776518.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 580 aa Download sequence |
MAASSSSTPF FGTREDNQNQ MIQQLSSTTP TSSTAPTAAP QKKKRNQPGT PNPDAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEVKRK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ESARHPTNFS TIGSHHLFGS NHMSLGLSQV GSQIPSLQDQ 240 NQPSINILRL GSAGAAKFEH LIPPSNPSSL QNMPTSAFFM PDAANQGFHQ DHQSHHGHGS 300 YLNKPLHGLM QLPDLQGNTN NPAAPANLFN LGFFSNNSAA SSISTSENAG ASANLPNSGF 360 LGSNQFNSGN AGGSGQGTGM FTTSMGDQVG SGLSSLYSTS MQHENISPHM SATALLQKAA 420 QMGSTTSSNT SSLLRGLGSS SSSGTKSDRP VLSANFGSNF GGGSSVTETL RSQMENDSNL 480 QGLMNSLANG NSSIFGAGHG QDHSNFGGFS GSGMTIEQQN NNANFCNVNE AKLTLDFLGV 540 GGMVRNIGGR QHGINISSLD PDVKSSAQAA TQHFGSAKLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02080.1 | 1e-126 | C2H2 family protein |