PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022776489.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 674aa MW: 72938.4 Da PI: 6.3277 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.3 | 7.1e-28 | 229 | 282 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl XP_022776489.1 229 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 282 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 37.4 | 5.9e-12 | 231 | 281 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ XP_022776489.1 231 RVVWSVELHQQFVGAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 281 678**********************************************97 PP | |||||||
3 | Response_reg | 78.9 | 1.7e-26 | 45 | 153 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+q+l++ y v++++++++al+ll+e++ +D++l D+ mp+mdG++ll++ e +lp+i+++a g + + + +k G XP_022776489.1 45 VLVVDDDITCLRILEQMLRRCLY-TVTTCSQAKAALNLLRERKgcFDVVLSDVYMPDMDGYKLLEHVGLEM-DLPVIMMSADGRTSAVMKGIKHG 137 89*********************.*******************************************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_022776489.1 138 ACDYLIKPIREEELKN 153 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 674 aa Download sequence |
MAAVQRVVQS SVSTSAAATS SYGVSPSSKG VEVVISDRFP AGLRVLVVDD DITCLRILEQ 60 MLRRCLYTVT TCSQAKAALN LLRERKGCFD VVLSDVYMPD MDGYKLLEHV GLEMDLPVIM 120 MSADGRTSAV MKGIKHGACD YLIKPIREEE LKNIWQHVVR KNLNENKELE HSGSLDDNDR 180 QKRGNDDAEY ASSVNDGADL SLKPQKKRGN AKEEDDGEIE NDDPSTSKKP RVVWSVELHQ 240 QFVGAVNQLG IDKAVPKRIL ELMNVPGLTR ENVASHLQKF RLYLKRISGV AQQGGIRDPL 300 CGPIEPNVKI GSVGRFDIQA LAASGQISPQ TLAALHAELL GRPAGNLVAA MDQPGFLQAS 360 LQGPKFIPVE HGVAFGQPLI KCQSSISKHF PQSIVSVEDV RSGFGAWSSN NISTAGPSSS 420 LGGLSSQNGN ILIDLLQQQQ QELQKPQQLQ QQQSTVPEPS RSIHVQPSCI VVPSQPSASF 480 QAGNSPVSIN QNGSFSRTAV IDYTLLSSQL NNSSMNFGQV SDVDLQTTGI LSGCIPTTVS 540 PAVLSCSVNA DNCTSRQVQT SSMTFKASRH LPGFVHSTCD VQGPYGSTKS GEVLDQASFN 600 NLGYINRGAC LPTRFSVDEF QSPMSSSSHG NVFSENIGTR VKQEPNMEFV DNAKVGIPIL 660 QQFPPNDLMS VFTE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-121 | ARR-B family protein |