PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776457.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 477aa MW: 53276.7 Da PI: 6.4317

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.0003	124	146	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg s+++ ++ Hi t+ XP_022776457.1 124 FECPICGASYRSEEEVSIHIETC 146 89******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MDEMKDKWNG FTKKVNNQFS LSSSSSGKFK GHGRVLGSSS SGPVNPILMH PTQTQIPTPK 60 PTPSSSSSNS KPLLHSKPPN YDQNKPSSIN NLEPTGKREN GFDPYNSLIT CSKVSKNGFT 120 LNVFECPICG ASYRSEEEVS IHIETCVNTN SSDRKGHDGD IRSNENESQE SRNELEVCVG 180 SFLSGKPPEG AVEVVHRLLR NIVKEPGNDK FRKIRMSNPR IREAVGDVAG GVELLVFVGF 240 ELKEEGGEMW AVMEVPKEEL ISLINKAIML LEPGKIEQLK QSENISPAAP AEKEESVEPK 300 KIDRQIQVFF SVPERVAAKI ELPDSFYNLS AEELKREADM RKKKIAESQF LIPKSYKEKQ 360 AKAVRQRYRR TIIRIQFPDG VVLQGVFAPW EPTSALYEFV SSALKEPCLE FELLDPILVK 420 RRVIPSFPAA SEKPITLEEE QLVPSALIKF KPIETDHIVF TGLSNELLEI SEPLVTN

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MDEMKDKWNG FTKKVNNQFS LSSSSSGKFK GHGRVLGSSS SGPVNPILMH PTQTQIPTPK  60
PTPSSSSSNS KPLLHSKPPN YDQNKPSSIN NLEPTGKREN GFDPYNSLIT CSKVSKNGFT  120
LNVFECPICG ASYRSEEEVS IHIETCVNTN SSDRKGHDGD IRSNENESQE SRNELEVCVG  180
SFLSGKPPEG AVEVVHRLLR NIVKEPGNDK FRKIRMSNPR IREAVGDVAG GVELLVFVGF  240
ELKEEGGEMW AVMEVPKEEL ISLINKAIML LEPGKIEQLK QSENISPAAP AEKEESVEPK  300
KIDRQIQVFF SVPERVAAKI ELPDSFYNLS AEELKREADM RKKKIAESQF LIPKSYKEKQ  360
AKAVRQRYRR TIIRIQFPDG VVLQGVFAPW EPTSALYEFV SSALKEPCLE FELLDPILVK  420
RRVIPSFPAA SEKPITLEEE QLVPSALIKF KPIETDHIVF TGLSNELLEI SEPLVTN