PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776358.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 300aa MW: 32591.3 Da PI: 8.7187

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.3	7.8e-42	24	100	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls++++yhrrhkvCevhsk+p+v+++g+eqrfCqqCsrfh+l efD++krsCr+rL++hn+rrrk+q+ XP_022776358.1 24 CLVDGCTADLSKCRDYHRRHKVCEVHSKTPKVTIRGQEQRFCQQCSRFHSLVEFDDGKRSCRKRLDGHNRRRRKPQP 100 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MESSTPTSFK RARAPGCGNQ VPSCLVDGCT ADLSKCRDYH RRHKVCEVHS KTPKVTIRGQ 60 EQRFCQQCSR FHSLVEFDDG KRSCRKRLDG HNRRRRKPQP DSLSVNSGTR YLPFSGPQIF 120 STTAITSSWI GAVKMETDIN SELNFSSRNS LFPGSSSNDY TGEKQLSFLQ STSSSLPGVS 180 VCQPLLNVSP SSSDSGCSRK MFANGLNQAI DSNRALSLLS SQSAETREIG LSPMVQSGLA 240 SSLIPNLQYN GLGMEGEQVG TILASDGSSN TNHRGHEMFG IGHPVSSASG THQTLSFSWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	98	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	4e-49	SBP family protein