PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022775857.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | B3 | ||||||||
Protein Properties | Length: 256aa MW: 30073.8 Da PI: 9.5008 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35 | 2.6e-11 | 142 | 234 | 3 | 82 |
EE-..-HHHHT.T-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 3 kvltpsdvlks.grlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvF 82 k l sdv+ + +r+++p + +++h +++ e+++++ l +s ++ +v+l+ ++ks++yv+t+ W++ vk+n+Lk D+v + XP_022775857.1 142 KPLFYSDVNPQaSRFSMPFSQLKTHeflnkteaeDLDDEKGMKVCLLEPSMEEISVTLKKwkyTGKSSSYVMTSTWNSVVKDNRLKIDDIVQL 234 6666677776667899999999999999888888778889*****************966344667777********************9965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MELLCLEDFK ETKLDPNWTA FDYLLEAAKV GLEKMQKPNF KLRYGEVKKR HDFGYLKYFL 60 YNAPEPPTQT LWESLDKNVG LKNKRKLKEE DDEEWEELKQ KLKRSKKEKP VRSIPPPDLP 120 ENFKQHIVEK KGGSGWILVI QKPLFYSDVN PQASRFSMPF SQLKTHEFLN KTEAEDLDDE 180 KGMKVCLLEP SMEEISVTLK KWKYTGKSSS YVMTSTWNSV VKDNRLKIDD IVQLWSFRAK 240 SKLCFALVKV QVPTRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05930.1 | 7e-15 | B3 family protein |