PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022775822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 489aa MW: 54009.1 Da PI: 7.2345 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 152.6 | 2.5e-47 | 116 | 271 | 2 | 134 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................ssssasece 74 +gkkdrhski+T+ g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k+aikelt++ s+a+ece XP_022775822.1 116 TGKKDRHSKIYTAHGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKAAIKELTENlpgvkhscsgggksvsstseseVVSAAKECE 210 79**************************************************************9988888777766553222211111112231 PP TCP 75 aesssssasnsssg...............kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134 + + a++a ++k++++++ s++ +a+esr arararertrekm+++ XP_022775822.1 211 -------------DnmgdqqvviargesmS-AAAARETKERKSRKVSFNPVARESRDMARARARERTREKMKMRG 271 .............13334445566665432.2222244444444444677888*******************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 489 aa Download sequence |
MFPSSNTYDP FPLTTHTMPG SSFSGDKQAA GSLLEDPPPP FWHFSAPFID DDADGLLMSH 60 LLSPGQQQIL GSSSNMAPPD SEINAASPIK ETKKVTTNRK RSANNAAKQG IPRKRTGKKD 120 RHSKIYTAHG PRDRRMRLSL QIARKFFDLQ DMLGFDKASK TIEWLFSKSK AAIKELTENL 180 PGVKHSCSGG GKSVSSTSES EVVSAAKECE DNMGDQQVVI ARGESMSAAA ARETKERKSR 240 KVSFNPVARE SRDMARARAR ERTREKMKMR GLEKSITSSD EPNPNELGRL QSSSPLEAGE 300 NSGPSTQPNF CCKVVAEEEE QHHQNTLHSL EHQMDSVSII EKFLGITRSS SMFNYSHSVA 360 DSEENCPVFP GYWGMNNERI QYSYCSMTNI NESTGNAQEQ NPSVIFMTDP NGQEQKSSPI 420 FLTQGENPSS NPMVNSYAKI MNHNSDSMNP SNAHEGISPT SILMSTSDIG LHSHYQENPA 480 VASKNRIFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 1e-31 | TCP family protein |