PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775822.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 489aa    MW: 54009.1 Da    PI: 7.2345
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP152.62.5e-471162712134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................ssssasece 74 
                     +gkkdrhski+T+ g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k+aikelt++                        s+a+ece
  XP_022775822.1 116 TGKKDRHSKIYTAHGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKAAIKELTENlpgvkhscsgggksvsstseseVVSAAKECE 210
                     79**************************************************************9988888777766553222211111112231 PP

             TCP  75 aesssssasnsssg...............kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134
                                  +               + a++a ++k++++++ s++ +a+esr  arararertrekm+++ 
  XP_022775822.1 211 -------------DnmgdqqvviargesmS-AAAARETKERKSRKVSFNPVARESRDMARARARERTREKMKMRG 271
                     .............13334445566665432.2222244444444444677888*******************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
MFPSSNTYDP FPLTTHTMPG SSFSGDKQAA GSLLEDPPPP FWHFSAPFID DDADGLLMSH  60
LLSPGQQQIL GSSSNMAPPD SEINAASPIK ETKKVTTNRK RSANNAAKQG IPRKRTGKKD  120
RHSKIYTAHG PRDRRMRLSL QIARKFFDLQ DMLGFDKASK TIEWLFSKSK AAIKELTENL  180
PGVKHSCSGG GKSVSSTSES EVVSAAKECE DNMGDQQVVI ARGESMSAAA ARETKERKSR  240
KVSFNPVARE SRDMARARAR ERTREKMKMR GLEKSITSSD EPNPNELGRL QSSSPLEAGE  300
NSGPSTQPNF CCKVVAEEEE QHHQNTLHSL EHQMDSVSII EKFLGITRSS SMFNYSHSVA  360
DSEENCPVFP GYWGMNNERI QYSYCSMTNI NESTGNAQEQ NPSVIFMTDP NGQEQKSSPI  420
FLTQGENPSS NPMVNSYAKI MNHNSDSMNP SNAHEGISPT SILMSTSDIG LHSHYQENPA  480
VASKNRIFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-31TCP family protein