PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775800.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 406aa    MW: 46075.6 Da    PI: 9.3941
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.93.3e-1567126155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+++GV++++++gr++A+++d  s+n    k+ k+++lg ++ +e Aa+a++ a+ k++g
  XP_022775800.1  67 SRFRGVSRHRWTGRFEAHLWDkGSWNPtqrKKgKQVYLGAYDEEESAARAYDLAAIKYWG 126
                     789******************988855556447*************************98 PP

2AP249.51.1e-15169220155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  XP_022775800.1 169 SRYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 220
                     79****99**********99966...3.6*************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
METVTAKSKL SPGRRRLCMA EDDTIETKCI KRRRRDPSTG ALGCNNQQGE QQVQGDQPTA  60
TTVKRSSRFR GVSRHRWTGR FEAHLWDKGS WNPTQRKKGK QVYLGAYDEE ESAARAYDLA  120
AIKYWGTSTF TNFPVSDYEK EIEIMKSVTK EEYLASLRRR SSGFSRGVSR YRGVARHHHN  180
GRWEARIGRV FGNKYLYLGT YSTQEEAAHA YDIAAIEYRG INAVTNFDLS TYIRWLKPGA  240
NHALVSEEVK TTLASQPMTT SNLFPNEQTN DLPLFNSNPF TIEAFDRPKK QDILQKKASV  300
NPRAKSSSPT ALGLLLRSSM FNKLVEQNLN ANYDEIEEND TKGLTEIVDN NGVGEMFYNE  360
IDHVPFMCSS NRDVLAGLES KESELPLYNK TVQSLWNGAL NIPSLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11435RRRLCMAEDDTIETKCIKRRRR
293101PTQRKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.12e-77AP2 family protein