PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775793.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 374aa MW: 40562.1 Da PI: 8.696

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.1	9.1e-40	50	171	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_022775793.1 50 PPKRTSTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSAShlrntyf 144 789******************************************************************99976666666666444444445565 PP TCP 89 ..........................k 89 + XP_022775793.1 145 npnfstqqltmrsewnqrnvfddlssQ 171 554444444444444444444444330 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MIMDGENGIR RPNFPLQLLE KKEQQEQPCS NTGNPETSSK ASLDPPKKPP PKRTSTKDRH 60 TKVEGRGRRI RMPATCAARV FQLTRELGHK SDGETIEWLL QQAEPAVIAA TGTGTIPANF 120 TSLNISLRSS GSSMSASHLR NTYFNPNFST QQLTMRSEWN QRNVFDDLSS QQQRRILFPG 180 VALSSEDSSN FPSSSSVNAF LQAKQELRDA SVDVVEAADT SMGKKRRPEQ QELSQNQMGS 240 YLIQSTTGSI PASHNPVPAT FWMVTNPSNQ VISGSGAGDP MWTFPSVSNY TNMYRGTMSS 300 GVHFMNFATP MALLPGQQLG SGIAAGGSVT DSHLGVIAAL NAYRPIPGTS VSESPASGSH 360 QVHHVGEDRH DSTS

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MIMDGENGIR RPNFPLQLLE KKEQQEQPCS NTGNPETSSK ASLDPPKKPP PKRTSTKDRH  60
TKVEGRGRRI RMPATCAARV FQLTRELGHK SDGETIEWLL QQAEPAVIAA TGTGTIPANF  120
TSLNISLRSS GSSMSASHLR NTYFNPNFST QQLTMRSEWN QRNVFDDLSS QQQRRILFPG  180
VALSSEDSSN FPSSSSVNAF LQAKQELRDA SVDVVEAADT SMGKKRRPEQ QELSQNQMGS  240
YLIQSTTGSI PASHNPVPAT FWMVTNPSNQ VISGSGAGDP MWTFPSVSNY TNMYRGTMSS  300
GVHFMNFATP MALLPGQQLG SGIAAGGSVT DSHLGVIAAL NAYRPIPGTS VSESPASGSH  360
QVHHVGEDRH DSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-47	TCP family protein