PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775755.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 213aa MW: 24801.2 Da PI: 6.7943

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.2	1.7e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva+iifs++gklye++s XP_022775755.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	101.1	1.6e-33	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++e +++s +qe+ kLk+++e Lqr+q h+lGedL++L keL qLe+qL+ slk+iRskK++++++q++elq+ke+ l e+n++Lr+kl+e XP_022775755.1 82 QTEIDSQSNYQEYLKLKAKVEVLQRSQSHFLGEDLGDLGTKELDQLEHQLDFSLKHIRSKKMQFMFDQLSELQRKEEFLLETNRNLRMKLDE 173 5677889**********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSILCD AEVALIIFSN RGKLYEFCSA 60 SSMAKSLERY HRYTYGLLEP GQTEIDSQSN YQEYLKLKAK VEVLQRSQSH FLGEDLGDLG 120 TKELDQLEHQ LDFSLKHIRS KKMQFMFDQL SELQRKEEFL LETNRNLRMK LDESTSTLPS 180 WETGEQSIPY NHPPPQSDEF FEPLECSSSL HIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	2e-87	MIKC_MADS family protein