PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775709.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 421aa MW: 46968.1 Da PI: 8.3144

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.9e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_022775709.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	16.2	3.1e-05	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_022775709.1 134 WVCEKCSKGYAVQSDYKAHLKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MLDNITVSAL PSSYSDPLTP LENGATQKRK RKPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET QEVKKRVFVC PEPSCLHHDP CHALGDLVGI 120 KKHFRRKHSN QKQWVCEKCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACTVRRVQPE LQALQPACSS RSASSTTPSS DANFSIALLP GLPMPKSTEP VCLISHASTC 240 DHHRQVQHNL ELQLLPSSST HSSRNSDENY STHLKLSIGS SEGSDKNEAK KLSLDTCREK 300 NVSETALEAT RLKEFANEQL KLAMAEKAYA EKARQEAKRQ IEMAELEFAS AQRIRQQAQG 360 ELEKAQVLKD QATKKISATI LHITCQACKH QFQTSTSVVP ADETSLAMSY MSSATTEGEG 420 E

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MLDNITVSAL PSSYSDPLTP LENGATQKRK RKPAGTPDPD AEVVSLSPKT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET QEVKKRVFVC PEPSCLHHDP CHALGDLVGI  120
KKHFRRKHSN QKQWVCEKCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACTVRRVQPE LQALQPACSS RSASSTTPSS DANFSIALLP GLPMPKSTEP VCLISHASTC  240
DHHRQVQHNL ELQLLPSSST HSSRNSDENY STHLKLSIGS SEGSDKNEAK KLSLDTCREK  300
NVSETALEAT RLKEFANEQL KLAMAEKAYA EKARQEAKRQ IEMAELEFAS AQRIRQQAQG  360
ELEKAQVLKD QATKKISATI LHITCQACKH QFQTSTSVVP ADETSLAMSY MSSATTEGEG  420
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-154	C2H2 family protein