PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775598.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 406aa    MW: 43243.5 Da    PI: 7.3093
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775598.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.81.1e-3983188289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                     + k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa+++ tgt++++a+++  + s +ss+s+ s +       
  XP_022775598.1  83 PLKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIASTGTGTIPANFTsLNISLRSSGSSISVPsqlrssg 177
                     6799*****************************************************************99987777777777555553333333 PP

             TCP  89 ..........k 89 
                               +
  XP_022775598.1 178 fnsnlsmqqrR 188
                     33333333330 PP

Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MEGGGSDHHQ LHHLDHHHHH QQHHRPNFPF QLLEKKEEEN QLCSSSSSPP FLPLPASSAA  60
DQPNTACSIS SLQISPEPSK KPPLKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL  120
GHKSDGETIE WLLQQAEPAV IASTGTGTIP ANFTSLNISL RSSGSSISVP SQLRSSGFNS  180
NLSMQQRRSL FPGIGLETTP TFLNYQSSSN LNSMFQAKQE LGDNSTSLEL SETEEGTVGR  240
KRRLEQDLSS QHQMGAYLLQ SSTGAIPASH GQIPANFWMV TNSNNQVMSG DPIWTFPSVN  300
NSALYRSTMS SGLHFMNFPA PMALLPGQQL GSSSVTSGGG GGGGGGSGGS SGISEGHLNM  360
LTGMNHYRQV SGSSESESQA SGSHSHHGGG GGGGGDDRHD GTSHHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.11e-60TCP family protein