PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022775566.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 256aa MW: 28449.5 Da PI: 8.1252 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.1 | 0.00028 | 85 | 107 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F ++ L H++ H XP_022775566.1 85 FECQYCFKEFANSQALGGHQNAH 107 89******************988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 256 aa Download sequence |
MEKDAYSLAS QTCDGANGCS QAGSCADKKL RLFGFELNPS KNNGNFLKGC AEGDESVNSS 60 NTISSTRETP FKEKSSTGET DDKKFECQYC FKEFANSQAL GGHQNAHKKE RMKKKRLQLQ 120 AKRASINCYL QPFQKSLGFS FQGSSPWYYD SPCYSAPEFT IYEESQISFN QYEQNAHLNG 180 SQTSKWYALP SQMIPFPQDY SSMFTLTQAD RSRENWPAVS IKPSSLTSSK QSCKSLDLQL 240 GLSLQSTIQS SSGSGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G10480.1 | 1e-21 | C2H2 family protein |