PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022775376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | SRS | ||||||||
Protein Properties | Length: 197aa MW: 21897.2 Da PI: 8.5857 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 123.3 | 3e-38 | 107 | 193 | 3 | 94 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssa 94 +g+ sCqdCGnqakkdC h+RCRtCCksrgfdC+thvkstW+pa+krrerqqqlaa+++ + + +++kr+re+ ++s+l++t+l+++ XP_022775376.1 107 AGGLSCQDCGNQAKKDCLHMRCRTCCKSRGFDCQTHVKSTWIPASKRRERQQQLAALQQLQ---LRGENPKRQREN--PTSSSLACTRLPTS 193 6789****************************************************96655...567778888876..66777888877765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 197 aa Download sequence |
MAGFFSLGGR GSNGQEDQQN NPTIEIPPES WFWYKNEDIP YKGLELWQQQ ELFQRHNSSN 60 NPQDQQQQDL YSSAAGLGVG PSRSSINVSD DSSSRSAFMM MRSSGGAGGL SCQDCGNQAK 120 KDCLHMRCRT CCKSRGFDCQ THVKSTWIPA SKRRERQQQL AALQQLQLRG ENPKRQRENP 180 TSSSLACTRL PTSASGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G51060.1 | 5e-41 | SRS family protein |