PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775287.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 428aa MW: 44943.7 Da PI: 8.9542

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.5	1.2e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022775287.1 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	11.5	0.00093	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022775287.1 137 WKCDKCSKKYAVQSDWKAHSKIC 159 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MPVDLDNSST ASGEASVSSS GNQNPPPKAT AKKKRNLPGM PDPDAEVIAL SPKALLATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSGKEVKKR VYVCPEPSCV HHDPTRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDCFIT 180 HRAFCDALAE ESARAQTQPQ PQNQNHAVAN PSLKSDPKVQ ATDSSSPPAP APTPAPASVS 240 TPAPVQVSAS TPAAPAVPQS TSDLSSSVLP IQSSGQERRQ YAPLPQPAMS ATALLQKAAQ 300 MGAAATNAYL LRGFGIVSSS SSSVQQDNMQ WGQGQVEPEN VSVAAGLGLG LPCDGSSGLK 360 ELMMGTPVFG PKQTTLDFLG LGMAAGGSPN GGLSALITSI GGGLDVAAAA AASFGGGDFT 420 SEDIGRSS

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MPVDLDNSST ASGEASVSSS GNQNPPPKAT AKKKRNLPGM PDPDAEVIAL SPKALLATNR  60
FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSGKEVKKR VYVCPEPSCV HHDPTRALGD  120
LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDCFIT  180
HRAFCDALAE ESARAQTQPQ PQNQNHAVAN PSLKSDPKVQ ATDSSSPPAP APTPAPASVS  240
TPAPVQVSAS TPAAPAVPQS TSDLSSSVLP IQSSGQERRQ YAPLPQPAMS ATALLQKAAQ  300
MGAAATNAYL LRGFGIVSSS SSSVQQDNMQ WGQGQVEPEN VSVAAGLGLG LPCDGSSGLK  360
ELMMGTPVFG PKQTTLDFLG LGMAAGGSPN GGLSALITSI GGGLDVAAAA AASFGGGDFT  420
SEDIGRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-114	C2H2 family protein