PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022775286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 527aa MW: 54859.6 Da PI: 8.0227 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.1 | 1.5e-05 | 61 | 83 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022775286.1 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP | |||||||
2 | zf-C2H2 | 11.1 | 0.0012 | 137 | 159 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022775286.1 137 WKCDKCSKKYAVQSDWKAHSKIC 159 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 527 aa Download sequence |
MPVDLDNSST ASGEASVSSS GNQNPPPKAT AKKKRNLPGM PDPDAEVIAL SPKALLATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSGKEVKKR VYVCPEPSCV HHDPTRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDCFIT 180 HRAFCDALAE ESARAQTQPQ PQNQNHAVAN PSLKSDPKVQ ATDSSSPPAP APTPAPASVS 240 TPAPVQVSAS TPAAPAVPQS TSDLSSSVLP IQSSELPENP TPMVEEVPAL VGLNGSCSTS 300 TSSVSNGSSS SSVFASLFAS STASVSLQPP AFTDLIQAMG QPDRPADLAP STSTEPISLC 360 LSSNHCSSIF GAAGQERRQY APLPQPAMSA TALLQKAAQM GAAATNAYLL RGFGIVSSSS 420 SSVQQDNMQW GQGQVEPENV SVAAGLGLGL PCDGSSGLKE LMMGTPVFGP KQTTLDFLGL 480 GMAAGGSPNG GLSALITSIG GGLDVAAAAA ASFGGGDFTS EDIGRSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-113 | C2H2 family protein |