PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775286.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 527aa    MW: 54859.6 Da    PI: 8.0227
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.11.5e-056183123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C+k F r  nL+ H r H
  XP_022775286.1 61 FVCEICNKGFQRDQNLQLHRRGH 83
                    89*******************88 PP

2zf-C2H211.10.0012137159123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC +C+k +  +s+ k H + +
  XP_022775286.1 137 WKCDKCSKKYAVQSDWKAHSKIC 159
                     58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    
MPVDLDNSST ASGEASVSSS GNQNPPPKAT AKKKRNLPGM PDPDAEVIAL SPKALLATNR  60
FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSGKEVKKR VYVCPEPSCV HHDPTRALGD  120
LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDCFIT  180
HRAFCDALAE ESARAQTQPQ PQNQNHAVAN PSLKSDPKVQ ATDSSSPPAP APTPAPASVS  240
TPAPVQVSAS TPAAPAVPQS TSDLSSSVLP IQSSELPENP TPMVEEVPAL VGLNGSCSTS  300
TSSVSNGSSS SSVFASLFAS STASVSLQPP AFTDLIQAMG QPDRPADLAP STSTEPISLC  360
LSSNHCSSIF GAAGQERRQY APLPQPAMSA TALLQKAAQM GAAATNAYLL RGFGIVSSSS  420
SSVQQDNMQW GQGQVEPENV SVAAGLGLGL PCDGSSGLKE LMMGTPVFGP KQTTLDFLGL  480
GMAAGGSPNG GLSALITSIG GGLDVAAAAA ASFGGGDFTS EDIGRSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50700.11e-113C2H2 family protein