PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775231.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 434aa MW: 49280.7 Da PI: 9.0407

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	52	74	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C+ F r nL+ H r+H XP_022775231.1 52 YVCEICNIGFQRDQNLQMHRRRH 74 9*********************9 PP
2	zf-C2H2	16.1	3.2e-05	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_022775231.1 129 WVCEKCSKGYAVQSDYKAHLKTC 151 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MLANNSCSSE PFSCIENGNN NNKKKRRPAG TPDPDAEVVS LSPKTLLESD RYVCEICNIG 60 FQRDQNLQMH RRRHNVPWKL LKRETPVVRK RVFVCPEPSC LHHDPCHALG DLVGIKKHFR 120 RKHSHHKQWV CEKCSKGYAV QSDYKAHLKT CGTRGHSCDC GRVFSRVESF IEHQDACQMV 180 RVRPEAQTLQ PACLSRTASR PSPSSDTNFN TATWPSLVLA RTKDTVFLSP TKDNSPKNAH 240 YHNLELQLLT TSNPPEVSVF PKKHDNQSTQ LQLSTVSSDT VEKIESTVTC TEKDKSKKST 300 HQEIHEKPVF VTSRLKEEAR KQLWLAMAEK AYAEEARQQA KRQIELAEQE FTKAKRIRQQ 360 AQAELEKAQA LKDHAIKQSN STILHITCHD CKQQFQARTP PEENSLVASY ISSAITEGEV 420 QNDIRTNLTK ATNT

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MLANNSCSSE PFSCIENGNN NNKKKRRPAG TPDPDAEVVS LSPKTLLESD RYVCEICNIG  60
FQRDQNLQMH RRRHNVPWKL LKRETPVVRK RVFVCPEPSC LHHDPCHALG DLVGIKKHFR  120
RKHSHHKQWV CEKCSKGYAV QSDYKAHLKT CGTRGHSCDC GRVFSRVESF IEHQDACQMV  180
RVRPEAQTLQ PACLSRTASR PSPSSDTNFN TATWPSLVLA RTKDTVFLSP TKDNSPKNAH  240
YHNLELQLLT TSNPPEVSVF PKKHDNQSTQ LQLSTVSSDT VEKIESTVTC TEKDKSKKST  300
HQEIHEKPVF VTSRLKEEAR KQLWLAMAEK AYAEEARQQA KRQIELAEQE FTKAKRIRQQ  360
AQAELEKAQA LKDHAIKQSN STILHITCHD CKQQFQARTP PEENSLVASY ISSAITEGEV  420
QNDIRTNLTK ATNT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	23	27	KKKRR
2	23	28	KKKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-113	C2H2 family protein