PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775204.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 519aa MW: 58840.9 Da PI: 8.097

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.9e-19	124	214	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f k l++s+v++ ++ lp f++ h ++ +++++++ledes r++ vk+ +k++ l++GW++F++ ++L egD++vF+l++ ++f +v XP_022775204.1 124 FAKSLVRSHVGSCFWMGLPGMFCKIH-LP-RKDTMIILEDESERQFHVKYYADKTG----LSAGWRQFCSVHNLLEGDVLVFQLVEPTKF--KVY 210 889******************666.44.5788************334444....*********************9876666..999 PP EE-S CS B3 96 vfrk 99 ++r+ XP_022775204.1 211 IIRA 214 9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MDQRVKKEAE EMQQRTTSFS GRRLKYAGEE DLTLAQLSHT PNLKPSSSRK KKNDKALTER 60 REKRKKSQSE SIIKHAVSDS GGKQISSKKN ISGDGGKCTP EIKSPAMIRA DEVQSNLEPE 120 FPSFAKSLVR SHVGSCFWMG LPGMFCKIHL PRKDTMIILE DESERQFHVK YYADKTGLSA 180 GWRQFCSVHN LLEGDVLVFQ LVEPTKFKVY IIRANDLTEL DGALGLLNLD AHTKQSDAEN 240 DTMVFKSAKR KRQDICIITE FPKRKIDDPE ADTTVFKCTK RKRPKSLPLA VVQKKNKRSG 300 LQRLACNLEQ PAEQSENDSE EVGSEVLEGF KRSVPTIQFK DITSFENFNI LVDGSVIDSE 360 LSEDIRDKYY KLCCSQNSFL HENIIQGINF KLIVGTISET VNIADAIRAS KLTTSRDDFD 420 SWNKTLKAFE LLGMNVGFLR TQLHRLVNLA FESEGSADAR RYIEAKTERA QIEDEIRNLE 480 AKLAELKDAC KTVGVEIGSL HSKAEIYELR FEEEVKAPW

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MDQRVKKEAE EMQQRTTSFS GRRLKYAGEE DLTLAQLSHT PNLKPSSSRK KKNDKALTER  60
REKRKKSQSE SIIKHAVSDS GGKQISSKKN ISGDGGKCTP EIKSPAMIRA DEVQSNLEPE  120
FPSFAKSLVR SHVGSCFWMG LPGMFCKIHL PRKDTMIILE DESERQFHVK YYADKTGLSA  180
GWRQFCSVHN LLEGDVLVFQ LVEPTKFKVY IIRANDLTEL DGALGLLNLD AHTKQSDAEN  240
DTMVFKSAKR KRQDICIITE FPKRKIDDPE ADTTVFKCTK RKRPKSLPLA VVQKKNKRSG  300
LQRLACNLEQ PAEQSENDSE EVGSEVLEGF KRSVPTIQFK DITSFENFNI LVDGSVIDSE  360
LSEDIRDKYY KLCCSQNSFL HENIIQGINF KLIVGTISET VNIADAIRAS KLTTSRDDFD  420
SWNKTLKAFE LLGMNVGFLR TQLHRLVNLA FESEGSADAR RYIEAKTERA QIEDEIRNLE  480
AKLAELKDAC KTVGVEIGSL HSKAEIYELR FEEEVKAPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	66	RKKKNDKALTERREKRKK
2	50	67	RKKKNDKALTERREKRKK
3	263	280	RKKKNDKALTERREKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	1e-35	B3 family protein